This work integrates measurements of the mechanical and transport properties with microstructures to understand deformation mechanisms in cemented mudrock. Cataclastic mechanisms are dominant down to nanometre scale. At low strain the fabric contains recognizable open fractures, while at high strain the reworked clay gouge shows resealing of initial fracture porosity. In the future, it will provide a microphysical basis for constitutive models to improve their extrapolation for long timescales.